{
  "_id": "6ac4bf7bf511ae58c09a0c85",
  "Package": "tidygate",
  "Type": "Package",
  "Title": "Interactively Gate Points",
  "Version": "1.0.16",
  "Authors@R": "c(person(given = \"Stefano\",\nfamily = \"Mangiola\",\nrole = c(\"aut\", \"cre\"),\nemail = \"mangiolastefano@gmail.com\"),\nperson(given = \"Wajid\",\nfamily = \"Jawaid\",\nrole = \"ctb\"),\nperson(given = \"William\",\nfamily = \"Hutchison\",\nrole = \"aut\",\nemail = \"hutchison.w@wehi.edu.au\",\ncomment = c(ORCID = \"0009-0001-6242-4269\"))\n)",
  "Maintainer": "Stefano Mangiola <mangiolastefano@gmail.com>",
  "Description": "Interactively gate points on a scatter plot. Interactively\ndrawn gates are recorded and can be applied programmatically to\nreproduce results exactly. Programmatic gating is based on the\npackage gatepoints by Wajid Jawaid (who is also an author of\nthis package).",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.3.2",
  "RdMacros": "lifecycle",
  "VignetteBuilder": "knitr",
  "Biarch": "true",
  "biocViews": "AssayDomain, Infrastructure",
  "URL": "https://github.com/stemangiola/tidygate",
  "BugReports": "https://github.com/stemangiola/tidygate/issues",
  "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libssl-dev\nzlib1g-dev",
  "Repository": "https://stemangiola.r-universe.dev",
  "Date/Publication": "2025-10-10 05:12:03 UTC",
  "RemoteUrl": "https://github.com/stemangiola/tidygate",
  "RemoteRef": "HEAD",
  "RemoteSha": "a5674f9a062d89a3fd3589f62f08fc8b938092df",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-06 09:25:28 UTC",
    "User": "root"
  },
  "Author": "Stefano Mangiola [aut, cre],\nWajid Jawaid [ctb],\nWilliam Hutchison [aut] (ORCID:\n<https://orcid.org/0009-0001-6242-4269>)",
  "_user": "stemangiola",
  "_type": "src",
  "_file": "tidygate_1.0.16.tar.gz",
  "_fileid": "https://r2.ropensci.org/50c45bb259b873c9e00cb563ab379fb851e4db09fdfa24d7b0f664f5c8241c81",
  "_filesize": 2245549,
  "_sha256": "50c45bb259b873c9e00cb563ab379fb851e4db09fdfa24d7b0f664f5c8241c81",
  "_expires": "2027-01-14T09:29:29.000Z",
  "_created": "2026-10-06T09:25:28.000Z",
  "_published": "2026-10-06T09:29:31.126Z",
  "_jobs": [
    {
      "job": 112200640121,
      "time": 187,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11401739076"
    },
    {
      "job": 112200640247,
      "time": 197,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11401947664"
    },
    {
      "job": 112200640295,
      "time": 127,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11401659127"
    },
    {
      "job": 112200640229,
      "time": 128,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11401873434"
    },
    {
      "job": 112198903718,
      "time": 239,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11401404401"
    },
    {
      "job": 112200640107,
      "time": 120,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "11401918016"
    },
    {
      "job": 112200640262,
      "time": 102,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11401609215"
    },
    {
      "job": 112200640228,
      "time": 96,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11401384907"
    },
    {
      "job": 112200640279,
      "time": 99,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11401444654"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/stemangiola/actions/runs/37442306895",
  "_status": "success",
  "_upstream": "https://github.com/stemangiola/tidygate",
  "_commit": {
    "id": "a5674f9a062d89a3fd3589f62f08fc8b938092df",
    "author": "william-hutchison <william.8191@fastmail.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #32 from william-hutchison/add-rasterisation-option\n\nAdd rasterisation option",
    "time": 1760073123
  },
  "_maintainer": {
    "name": "Stefano Mangiola",
    "email": "mangiolastefano@gmail.com",
    "login": "stemangiola",
    "twitter": "@steman_research",
    "description": "",
    "uuid": 7232890
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "lifecycle",
      "role": "Imports"
    },
    {
      "package": "scales",
      "role": "Imports"
    },
    {
      "package": "magrittr",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "viridis",
      "role": "Imports"
    },
    {
      "package": "grDevices",
      "role": "Imports"
    },
    {
      "package": "RColorBrewer",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "role": "Imports"
    },
    {
      "package": "plotly",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "xfun",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "markdown",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "readr",
      "role": "Suggests"
    }
  ],
  "_owner": "stemangiola",
  "_selfowned": true,
  "_usedby": 2,
  "_updates": [
    {
      "week": "2025-41",
      "n": 1
    }
  ],
  "_tags": [],
  "_topics": [
    "assaydomain",
    "infrastructure",
    "clustering",
    "datavis",
    "dataviz",
    "dplyr",
    "drawing",
    "facs",
    "gate",
    "ggplot2",
    "interactive",
    "pipe",
    "programmatic",
    "seurat",
    "single-cell",
    "single-cell-rna-seq",
    "tibble",
    "tidy-data",
    "tidyverse"
  ],
  "_stars": 26,
  "_contributors": [
    {
      "user": "stemangiola",
      "count": 106,
      "uuid": 7232890
    },
    {
      "user": "william-hutchison",
      "count": 57,
      "uuid": 88420272
    },
    {
      "user": "davisvaughan",
      "count": 2,
      "uuid": 19150088
    },
    {
      "user": "hadley",
      "count": 2,
      "uuid": 4196
    },
    {
      "user": "mblue9",
      "count": 1,
      "uuid": 5591821
    }
  ],
  "_userbio": {
    "uuid": 7232890,
    "type": "user",
    "name": "Stefano Mangiola",
    "followers": 242
  },
  "_downloads": {
    "count": 422,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/tidygate"
  },
  "_devurl": "https://github.com/stemangiola/tidygate",
  "_searchresults": 19,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/readme.html",
    "extra/readme.md",
    "extra/tidygate.html"
  ],
  "_homeurl": "https://github.com/stemangiola/tidygate",
  "_realowner": "stemangiola",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.2.7",
      "date": "2020-07-06"
    },
    {
      "version": "0.2.8",
      "date": "2020-09-27"
    },
    {
      "version": "0.3.2",
      "date": "2020-12-03"
    },
    {
      "version": "0.4.0",
      "date": "2021-01-18"
    },
    {
      "version": "0.4.7",
      "date": "2021-05-03"
    },
    {
      "version": "0.4.8",
      "date": "2022-01-04"
    },
    {
      "version": "0.4.9",
      "date": "2022-01-20"
    },
    {
      "version": "0.4.10",
      "date": "2024-01-23"
    },
    {
      "version": "1.0.13",
      "date": "2024-07-12"
    },
    {
      "version": "1.0.14",
      "date": "2024-09-17"
    },
    {
      "version": "1.0.19",
      "date": "2025-12-11"
    }
  ],
  "_exports": [
    "fhs",
    "gate",
    "gate_chr",
    "gate_int",
    "server",
    "ui"
  ],
  "_datasets": [
    {
      "name": "demo_gate_data",
      "title": "Demo gate data",
      "object": "demo_gate_data",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "x",
        "y",
        ".gate"
      ],
      "rows": 26,
      "table": true,
      "tojson": true
    },
    {
      "name": "gate_list",
      "title": "Example gate_list",
      "object": "gate_list",
      "class": [
        "list"
      ],
      "fields": [],
      "table": true,
      "tojson": true
    },
    {
      "name": "tidygate_data",
      "title": "Example data set",
      "object": "tidygate_data",
      "class": [
        "spec_tbl_df",
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "group",
        "hierarchy",
        "ct 1",
        "ct 2",
        "relation",
        "cancer_ID",
        "Dim1",
        "Dim2"
      ],
      "rows": 2240,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "demo_gate_data",
      "title": "Demo gate data",
      "topics": [
        "demo_gate_data"
      ]
    },
    {
      "page": "fhs",
      "title": "Freehand select",
      "topics": [
        "fhs"
      ]
    },
    {
      "page": "gate",
      "title": "Gate points",
      "topics": [
        "gate"
      ]
    },
    {
      "page": "gate_chr-methods",
      "title": "Label points within a scatter plot drawing a gate",
      "topics": [
        "gate_chr",
        "gate_int"
      ]
    },
    {
      "page": "gate_chr.numeric",
      "title": "gate_chr",
      "topics": [
        "gate_chr.numeric"
      ]
    },
    {
      "page": "gate_int.numeric",
      "title": "gate_int",
      "topics": [
        "gate_int.numeric"
      ]
    },
    {
      "page": "gate_interactive",
      "title": "Interactively gate data with a simple scatter plot",
      "topics": [
        "gate_interactive"
      ]
    },
    {
      "page": "gate_programmatic",
      "title": "Programmatically gate data with pre-recorded lasso selection coordinates",
      "topics": [
        "gate_programmatic"
      ]
    },
    {
      "page": "server",
      "title": "Run Shiny App for interactive gating",
      "topics": [
        "server"
      ]
    },
    {
      "page": "ui",
      "title": "Create Shiny App UI",
      "topics": [
        "ui"
      ]
    }
  ],
  "_readme": "https://github.com/stemangiola/tidygate/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "base64enc",
    "bslib",
    "cachem",
    "cli",
    "commonmark",
    "cpp11",
    "crosstalk",
    "curl",
    "data.table",
    "digest",
    "dplyr",
    "evaluate",
    "farver",
    "fastmap",
    "fontawesome",
    "fs",
    "generics",
    "ggplot2",
    "glue",
    "gridExtra",
    "gtable",
    "highr",
    "htmltools",
    "htmlwidgets",
    "httpuv",
    "httr",
    "isoband",
    "jquerylib",
    "jsonlite",
    "knitr",
    "labeling",
    "later",
    "lazyeval",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "openssl",
    "otel",
    "pillar",
    "pkgconfig",
    "plotly",
    "promises",
    "purrr",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "rmarkdown",
    "S7",
    "sass",
    "scales",
    "shiny",
    "sourcetools",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "tinytex",
    "utf8",
    "vctrs",
    "viridis",
    "viridisLite",
    "withr",
    "xfun",
    "xtable",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "introdution.Rmd",
      "filename": "introdution.html",
      "title": "tidygate: high-level data analysis and manipulation in tidyverse style",
      "engine": "knitr::knitr",
      "headings": [
        "Introduction",
        "Installation",
        "Example usage"
      ],
      "created": "2020-06-26 07:33:46",
      "modified": "2024-07-05 05:40:08",
      "commits": 7
    }
  ],
  "_score": 6.772908194971272,
  "_indexed": true,
  "_nocasepkg": "tidygate",
  "_universes": [
    "stemangiola"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.16",
      "date": "2026-10-06T09:28:19.000Z",
      "distro": "resolute",
      "commit": "a5674f9a062d89a3fd3589f62f08fc8b938092df",
      "fileid": "https://r2.ropensci.org/ae00cf86d99eb64d3115725c62a3e703c68cc8a0a6e435ec600da3bd9c181ebf",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/stemangiola/actions/runs/37442306895"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0.16",
      "date": "2026-10-06T09:28:32.000Z",
      "distro": "resolute",
      "commit": "a5674f9a062d89a3fd3589f62f08fc8b938092df",
      "fileid": "https://r2.ropensci.org/4587ff0d03e2acddcaf722762fe974fb3272ad4d8d010739d7518cd65734dd0f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/stemangiola/actions/runs/37442306895"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.16",
      "date": "2026-10-06T09:27:24.000Z",
      "commit": "a5674f9a062d89a3fd3589f62f08fc8b938092df",
      "fileid": "https://r2.ropensci.org/c5666e0094204bda367010efc43f4db43117d7d4f664c7ee0247dc3a3ba58eb1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/stemangiola/actions/runs/37442306895"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0.16",
      "date": "2026-10-06T09:27:23.000Z",
      "commit": "a5674f9a062d89a3fd3589f62f08fc8b938092df",
      "fileid": "https://r2.ropensci.org/fa8c79905546cc4dc08b3606319b8bd31fe42616509c92744092afa06cd57f9b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/stemangiola/actions/runs/37442306895"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.16",
      "date": "2026-10-06T09:27:45.000Z",
      "commit": "a5674f9a062d89a3fd3589f62f08fc8b938092df",
      "fileid": "https://r2.ropensci.org/12c66bc73955671198dbfb4aff5a3f1e371c992640b7cc968a1bc49e2673a469",
      "status": "success",
      "buildurl": "https://github.com/r-universe/stemangiola/actions/runs/37442306895"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.16",
      "date": "2026-10-06T09:26:48.000Z",
      "commit": "a5674f9a062d89a3fd3589f62f08fc8b938092df",
      "fileid": "https://r2.ropensci.org/bcd0ea5f2a6e05866853a243efdde8ea8eae3ec296f085ecb48bd582910dbc42",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/stemangiola/actions/runs/37442306895"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.16",
      "date": "2026-10-06T09:26:38.000Z",
      "commit": "a5674f9a062d89a3fd3589f62f08fc8b938092df",
      "fileid": "https://r2.ropensci.org/a3f701ae40f074286ca050687f4c6c76a437aa6f79b91a8318cd346d6acc7088",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/stemangiola/actions/runs/37442306895"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0.16",
      "date": "2026-10-06T09:26:42.000Z",
      "commit": "a5674f9a062d89a3fd3589f62f08fc8b938092df",
      "fileid": "https://r2.ropensci.org/b207235f925d551c261a9caac5f35a380b433d8c52c06d15410accc53ad234cf",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/stemangiola/actions/runs/37442306895"
    }
  ]
}