- ppcseq::countscounts
- tidybulk::tximeta_summarizeToGene_objectNeeded for tests tximeta_summarizeToGene_object, It is SummarizedExperiment from tximeta
- tidybulk::vignette_manuscript_signature_boxplotNeeded for vignette vignette_manuscript_signature_boxplot
- tidybulk::vignette_manuscript_signature_tsneNeeded for vignette vignette_manuscript_signature_tsne
- tidybulk::vignette_manuscript_signature_tsne2Needed for vignette vignette_manuscript_signature_tsne2
- tidybulk::X_cibersortCibersort reference
- tidygate::demo_gate_dataDemo gate data
- tidygate::gate_listExample gate_list
- tidygate::tidygate_dataExample data set
- tidyHeatmap::N52Example data set N52
- tidyHeatmap::pasillaExample data set Pasilla
- tidyseurat::cell_type_dfCell types of 80 PBMC single cells
- tidyseurat::pbmc_small_nested_interactionsIntercellular ligand-receptor interactions for 38 ligands from a single cell RNA-seq cluster.
- tidySingleCellExperiment::cell_type_dfCell types of 80 PBMC single cells
- tidySingleCellExperiment::pbmc_smallpbmc_small
- tidySingleCellExperiment::pbmc_small_nested_interactionsIntercellular ligand-receptor interactions for 38 ligands from a single cell RNA-seq cluster.
- tidySummarizedExperiment::pasillaRead counts of RNA-seq samples of Pasilla knock-down by Brooks et al.
- tidySummarizedExperiment::seRead counts of RNA-seq samples derived from Pasilla knock-down by Brooks et al.
